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泽布拉林 /Zebularine {[allProObj[0].p_purity_real_show]}

货号:A162514 同义名: NSC309132;4-Deoxyuridine

Zebularine is a DNA methylation inhibitor which forms a covalent complex with DNA methyltransferases, it also inhibits cytidinedeaminase with Ki of 2 μM.

Zebularine 化学结构 CAS号:3690-10-6
Zebularine 化学结构
CAS号:3690-10-6
Zebularine 3D分子结构
CAS号:3690-10-6
Zebularine 化学结构 CAS号:3690-10-6
Zebularine 3D分子结构 CAS号:3690-10-6
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Zebularine 纯度/质量文件 产品仅供科研

货号:A162514 标准纯度: {[allProObj[0].p_purity_real_show]}
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产品名称 DNA Methyltransferase 其他靶点 纯度
6-Thioguanine 98%
Zebularine 98%
Procainamide hydrochloride 99%
5-Azacytidine 95%
Decitabine 99%
SGI-1027 ++

DNMT1, IC50: 6 μM

DNMT3A, IC50: 7.5 μM

99%+
RG108 +++

DNA methyltransferase, IC50: 115 nM

99%+
Guadecitabine sodium 99+%
1. 鼠标悬停在“+”上可以显示相关IC50的具体数值。"+"越多,抑制作用越强。2. "✔"表示该化合物对相应的亚型有抑制作用,但抑制强度暂时没有相关数据。

Zebularine 生物活性

靶点
  • DNA Methyltransferase

描述 The DNA methyltransferase (DNMT) family are enzymes that can mediate the DNA methylation. Inhibiting the DNMTs have shown particular promise in reducing the formation of tumors[6]. Zebularine is a second-generation inhibitor of DNMT with IC50 value of 95 nM on DNMT1[7]. The TFK-1 and HuCCT1 cells were treated with zebularine from 100 - 1000 µM for 72 hours. The cell viability was significantly reduced in a dose dependent manner measured by WST assay. The protein expression level of DNMT1, DNMT3a, DNMT3b examined by western blotting assay was significantly inhibited for both cell lines at concentration of 400 µM and above[8]. BALB/c nude mice with tumor were treated with 10, 50 and 100 mg/kg zebularine via oral gavage in a solution of 0.45% saline every four days for 20 days. The tumor growth was reduced in a dose dependent manner and the cell death in the tumor mass via apoptosis was induced by the treatement of zebularine as measured by the TUNEL assay[9].
作用机制 Zebularine could form tight covalent complexes between the DNMT proteins and zebularine-substitute DNA[10].

Zebularine 细胞研究

细胞系 浓度 检测类型 检测时间 活动说明 数据源
human HCT15 cells 100 μM Function assay 8 days Induction of p16 gene expression in human HCT15 cells at 100 uM after 8 days by real time PCR in presence of 100 mM thymidine 19006382
human T24 cells 100 μM Function assay 8 days Induction of p16 gene expression in human T24 cells at 100 uM after 8 days by real time PCR in presence of 100 mM thymidine 19006382

Zebularine 动物研究

Dose Mice: 500 mg/kg[3] (i.p.); 100 mg/kg[4] (i.v.); 1000 mg/kg[4] (p.o.) Dog: 4 mg/kg, 8 mg/kg[5] (p.o.)
Administration i.p., i.v., p.o.
Pharmacokinetics
Animal Mice[4] Rats[4] Monkeys[4]
Dose 100 mg/kg (i.v.)
1000 mg/kg (p.o.)
50 mg/kg (i.v.)
250 mg/kg (p.o.)
500 mg/kg
Administration i.v.
p.o.
i.v.
p.o.
i.v. or p.o.
F 6.7% (p.o.) 3.1% (p.o.) 0.1% (p.o.)
T1/2 40 min (i.v.) 363 min (i.v.) 70 min (i.v.)
AUC 7323 g/ml·min (i.v.)
4935 g/ml·min (p.o.)
12526 g/ml·min (i.v.)
1969 g/ml·min (p.o.)
88020 g/ml·min (i.v.)
84 g/ml·min (p.o.)
CLapp 203 ml/min/kg (p.o.) 127 ml/min/kg (p.o.) 6021 ml/min/kg (p.o.)
CLtb 13.65 ml/min/kg (i.v.) 3.99 ml/min/kg (i.v.) 5.68 ml/min/kg (i.v.)

Zebularine 参考文献

[1]Lemaire M, Momparler LF, et al. Inhibition of cytidine deaminase by zebularine enhances the antineoplastic action of 5-aza-2'-deoxycytidine. Cancer Chemother Pharmacol. 2009 Feb;63(3):411-6.

[2]Zhou L, Cheng X, et al. Zebularine: a novel DNA methylation inhibitor that forms a covalent complex with DNA methyltransferases. J Mol Biol. 2002 Aug 23;321(4):591-9.

[3]Sabatino MA, Geroni C, et al. Zebularine partially reverses GST methylation in prostate cancer cells and restores sensitivity to the DNA minor groove binder brostallicin. Epigenetics. 2013 Jun;8(6):656-65.

[4]Holleran JL, Parise RA, et al. Plasma pharmacokinetics, oral bioavailability, and interspecies scaling of the DNA methyltransferase inhibitor, zebularine. Clin Cancer Res. 2005 May 15;11(10):3862-8.

[5]Fulkerson CM, Dhawan D, et al. Pharmacokinetics and toxicity of the novel oral demethylating agent zebularine in laboratory and tumor bearing dogs. Vet Comp Oncol. 2017 Mar;15(1):226-236.

[6]Gravina GL, Festuccia C, Marampon F, Popov VM, Pestell RG, Zani BM, Tombolini V. Biological rationale for the use of DNA methyltransferase inhibitors as new strategy for modulation of tumor response to chemotherapy and radiation. Mol Cancer. 2010 Nov 25;9:305.

[7]Gros C, Chauvigné L, Poulet A, Menon Y, Ausseil F, Dufau I, Arimondo PB. Development of a universal radioactive DNA methyltransferase inhibition test for high-throughput screening and mechanistic studies. Nucleic Acids Res. 2013 Oct;41(19):e185.

[8]Nakamura K, Nakabayashi K, Htet Aung K, Aizawa K, Hori N, Yamauchi J, Hata K, Tanoue A. DNA methyltransferase inhibitor zebularine induces human cholangiocarcinoma cell death through alteration of DNA methylation status. PLoS One. 2015 Mar 23;10(3):e0120545.

[9]Tan W, Zhou W, Yu HG, Luo HS, Shen L. The DNA methyltransferase inhibitor zebularine induces mitochondria-mediated apoptosis in gastric cancer cells in vitro and in vivo. Biochem Biophys Res Commun. 2013 Jan 4;430(1):250-5.

[10]Hurd PJ, Whitmarsh AJ, Baldwin GS, Kelly SM, Waltho JP, Price NC, Connolly BA, Hornby DP. Mechanism-based inhibition of C5-cytosine DNA methyltransferases by 2-H pyrimidinone. J Mol Biol. 1999 Feb 19;286(2):389-401.

Zebularine 实验方案

计算器
存储液制备 1mg 5mg 10mg

1 mM

5 mM

10 mM

4.38mL

0.88mL

0.44mL

21.91mL

4.38mL

2.19mL

43.82mL

8.76mL

4.38mL

Zebularine 技术信息

CAS号3690-10-6
分子式C9H12N2O5
分子量 228.202
别名 NSC309132;4-Deoxyuridine;Pyrimidin-2-one beta-ribofuranoside;Pyrimidin-2-one ribonucleoside
运输蓝冰
存储条件

液体 -20°C:3-6个月-80°C:12个月

粉末 Sealed in dry,2-8°C

溶解度

DMSO: 105 mg/mL(460.12 mM),注意:DMSO长时间开封后,会吸水并导致溶解能力下降,请避免使用长期开封的DMSO

H2O: 50 mg/mL(219.1 mM),配合低频超声助溶

动物实验配方
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